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compute.adjacency.matrix()
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Computes the adjacency matrix of a multiplex network |
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compute.transition.matrix()
|
Computes the transition matrix of a multiplex and heterogeneous network |
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create.multiplex()
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Create multiplex graphs from individual networks |
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create.multiplexHet()
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Create multiplex heterogeneous graphs from individual networks |
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create.multiplexHetNetwork.topResults()
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Creates a Network with the top results of the Random Walk with restart on
a Multiplex and Heterogeneous Network |
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create.multiplexNetwork.topResults()
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Creates a Network with the top results of the Random Walk with restart on
a Multiplex Network |
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Disease_Network
|
A disease-disease similarity network. |
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GeneDiseaseRelations
|
Diseases and their causative genes |
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isMultiplex()
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Is this R object a Multiplex object? |
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isMultiplexHet()
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Is this R object a Multiplex Heterogeneous object? |
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isRWRMH_Results()
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Is this R object a RWR on Multiplex-Heterogeneous object (Results of the
RWR-MH)? |
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isRWRM_Results()
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Is this R object a RWR on Multiplex object (Results of the RWR-M)? |
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normalize.multiplex.adjacency()
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Computes column normalization of an adjacency matrix |
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Pathway_Network
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A pathway network (Pathway network) |
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PPI_Network
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A protein-protein physical interaction network (PPI network) |
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Random.Walk.Restart.Multiplex()
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Performs Random Walk with Restart on a Multiplex Network |
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Random.Walk.Restart.MultiplexHet()
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Performs Random Walk with Restart on a Multiplex and Heterogeneous
Network |